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<title>NINJA: Class Members - Variables</title>
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   <div id="projectname">NINJA
   &#160;<span id="projectnumber">2.x</span>
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&#160;

<h3><a id="index_n"></a>- n -</h3><ul>
<li>n
: <a class="el" href="class_array_heap_ext_mem.html#a70670ca373b14372e320a98720efd50b">ArrayHeapExtMem</a>
</li>
<li>name
: <a class="el" href="class_tree_node.html#a5d0746a3940f74ebdd89b9d1b6aaeb1c">TreeNode</a>
</li>
<li>names
: <a class="el" href="class_sequence_file_reader.html#ac5ad200019599845c0f1bc226ce0161b">SequenceFileReader</a>
, <a class="el" href="class_tree_builder.html#adf035970b6627d0249558400609b2cf9">TreeBuilder</a>
, <a class="el" href="class_tree_builder_ext_mem.html#a1ed776826f04444636f65539fcfe5672">TreeBuilderExtMem</a>
, <a class="el" href="class_tree_builder_manager.html#a5710efedbd3702d1dc95d0722e757351">TreeBuilderManager</a>
</li>
<li>newCalculation
: <a class="el" href="class_distance_calculator.html#aab6b17cfa53aa960ed4fcfadfb160408">DistanceCalculator</a>
</li>
<li>newDistanceMethod
: <a class="el" href="class_tree_builder_manager.html#a4c60ce04a47c306072401de1d9d83571">TreeBuilderManager</a>
</li>
<li>newK
: <a class="el" href="class_tree_builder_ext_mem.html#aa771bc9ec52cd29ef693b42f6d2c463b">TreeBuilderExtMem</a>
</li>
<li>nextActiveNode
: <a class="el" href="class_candidate_heap.html#abca9b432b70973537f56f0f8e0763995">CandidateHeap</a>
, <a class="el" href="class_tree_builder.html#a38fb7d80b54e7ef8fb45eb645a92db39">TreeBuilder</a>
, <a class="el" href="class_tree_builder_ext_mem.html#af855fdf19b20a592e844f6c565a4e982">TreeBuilderExtMem</a>
</li>
<li>nextInternalNode
: <a class="el" href="class_tree_builder_ext_mem.html#afe236f6821d59ebf61799db00a380103">TreeBuilderExtMem</a>
</li>
<li>njTmpDir
: <a class="el" href="class_tree_builder_ext_mem.html#a4b2b84b017dd53228e2a6508bd08ad99">TreeBuilderExtMem</a>
, <a class="el" href="class_tree_builder_manager.html#a7e62c0d18ca2e9782f6e1f689b4388d4">TreeBuilderManager</a>
</li>
<li>nodes
: <a class="el" href="class_tree_builder.html#a4a5d969e496a1b78847521b3dff8ce9e">TreeBuilder</a>
, <a class="el" href="class_tree_builder_ext_mem.html#ae942b98bb08c642021daf86883316eeb">TreeBuilderExtMem</a>
</li>
<li>NUM_RAND_DIR_CHARS
: <a class="el" href="class_tree_builder_manager.html#a9ae531e04f5efb9fe8228ede332404dd">TreeBuilderManager</a>
</li>
<li>numArrays
: <a class="el" href="class_array_heap_ext_mem.html#ac04b46fff6274414080239459dcefc6a">ArrayHeapExtMem</a>
</li>
<li>numberOfSequences
: <a class="el" href="class_distance_calculator.html#a0a797aedff55422df2d8dc526d397bcb">DistanceCalculator</a>
</li>
<li>numCandTriplesToDisk
: <a class="el" href="class_tree_builder_ext_mem.html#a1d270a24e9b6d01042d3d75271732546">TreeBuilderExtMem</a>
</li>
<li>numFields
: <a class="el" href="class_array_heap_ext_mem.html#a4a2c93680e45859648cdc17dd946d1c9">ArrayHeapExtMem</a>
</li>
<li>numFieldsPerBlock
: <a class="el" href="class_array_heap_ext_mem.html#ab2b15fcf51ebc7c0ba8b99e516d9b345">ArrayHeapExtMem</a>
</li>
<li>numNodesPerBlock
: <a class="el" href="class_array_heap_ext_mem.html#aa0b6486610fe9b60257a961fbec30261">ArrayHeapExtMem</a>
</li>
<li>numPages
: <a class="el" href="class_distance_reader.html#ac55d0029e686fdfcc5b260877c422e81">DistanceReader</a>
, <a class="el" href="class_distance_reader_ext_mem.html#a651a0219204b2d93154651c0abd392cd">DistanceReaderExtMem</a>
</li>
<li>numSeqs
: <a class="el" href="class_sequence_file_reader.html#aac56176cc7a6ed92728a106576ec3382">SequenceFileReader</a>
</li>
<li>numSlots
: <a class="el" href="class_array_heap_ext_mem.html#a6eaf293a2ab27192958b9d14603b0ae5">ArrayHeapExtMem</a>
</li>
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